Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901726.1_cds_XP_016451767.1_46080
CDS Infomation

[gene=LOC107776392] [db_xref=GeneID:107776392] [protein=putative late blight resistance protein homolog R1B-16] [protein_id=XP_016451767.1] [location=30946..33126] [gbkey=CDS]
Sequence

ATGGAGGATATTGTTGAGAGTTGTGACAGAACTCCTACTCCCACAAAGTCTTCTTCCCAA
CGTAGATATTCACCAATTGATGAAGACCTAGAGGGTCTTCAAGATGTAGCAGAACAAATG
ATGCATCAATTGATTAGAGGGACAGCGGAGCTGGATGTTATATCGATTGTAGGAATGCCC
GGACAAAGCAAAGCAACTTTAGTTAGAAGGTTGTACAATAATCCTTCAATTGTTTCTCGC
TTTGATGTTCGGGCGTGGTGCTCCTTTCCACAAAGATATAACGTGGGAAAGCTGTTGCTA
GAGATACTAAAACAAATTATCGCTGGTAAGCGTATTACTGTAGGTGGTCATAGCATGGCT
GACATGTTGCACATTAGTTTAATGGGAAAGAGATATCTCATCGTATTGGATAATATACAG
GAAGTCAAGGCATGGGATGTGTTGTGGTCATCTTTCCCTGATGATAAAAATAGAAGCAGA
ATAATAGTAACAACTCAAATTCAGCAAGTGGCAATGGGGCTTAAGCACCATATTGATCCT
TATTTCCTTCGATTGCTAAATGATGATGAGAGTTTTAAGTTATGGCAGAGGGCTGCTTTT
CAAGGAGAGATATGTCCTCCGGAACTATTTGAAGTAGGACGGCTAGTTACCCGAGGATGT
AAAGGATTGACAGATCTGATTATCATGATTGCTGGAAGTATTCCGAAAAAGGAAAGGGGA
GATCCTAAATTGTGGCTTAAGGTTGCACGTGAATTAAGCTCTCATTCTTTAGATGACTTG
CTTATGAAAATGATACAGTCAAGTTATGACCGTTTAGAGGATCATTTAAAGTGTTGCCTT
CTGTACATGGGATTGTTTCCTAATGGTTATGAAATTCCAGTGTCTGATTTGCTGAAGTGG
TGGATAGCTGAAGAGTTTGTGCAGAACATTGACACATTGAAACTAGAAGAAACATCAAAG
AGTTGCTTGTACGATCTTGTTGACAGATACCTAATAACGGTTACTGAAACAAAAAGTGAC
GGTGAAATAAAATACTGCAAAGTTCGTGAAGAAGTGCATGATTTTTGCTCGAGAACAATT
AGAGTAGAAAAGTTTGTGCAGCTCGTAGTGCCATATAATCCACATCAACCTGCAGTAGAT
ACAGATGAACAAAGGAAATGCATGTATATACATGACACTATGAAAAATGAATATTCGTCG
GACAAGGCAGAGTCTTTCAGAGAAACTCAGGGGTCTCTAGAGTTCATTGCGCATCCAAAA
TTCAGTATACCTCACCGCACTAATCTTTATCCTTTACTTAATGACTTCAGACTTATTAGG
GTGTTGCATTTATTGGATATGTACTTAGAAAGTTCTTGGGTTACTGCATTCCAATCACTA
ACTCACTTGCGGTACCTTGCAATTTTTGTCAAGGAACTTGATTTCAAGTGGTTATCACAC
CTACTCCATCTGCAAACCTTGCGGGTTCGTTCATCTTATACGATGATATCACCTGCTATT
TGGAAAATGGCAAAGTTGAGGCATGTTGATATAAACGAATTTTCAATCACATGGGAAGAG
AATGAGCGAGTGAATTTTGTAGAATCTTCAGAAATTGTGTTATACAACTTGAAGACCCTT
GGCATGTTTTATATGTCTGTGGCTCACATGACTCCAAATTTCTGGGAGAAGTTTCCAAAT
CTTGAAGAACTAAGGCTCCACATTGATGAATTTGGAGATGTTCCTGATGATTCTGTGCTC
TCCAGAAAATTTGACTTCCCCTCAAGTCTAAAGGTTTTGTCCCTCTGCGACATTTTTCTG
ACGGATGAAGTAGTTTTAACTATTGCAAGACTGCGACACCTTGAGACTCTTAAATTATCC
GAGATATACTTTACGGGGGAAAAGCTCTTGGACCTCAATGATAACGAGTTCCCTGCGCTC
AGAGTTTTAAAACTACATCATGGGTTTATGATGCAGTGGATTTGCTCAGATGCATCTTCA
TCATTTGCTCTGCTTGAAACACTAGTCATAAAAAGTTGTTCCAAACTTGAGGAGATCCCA
TATAGCTTTGCGGATATTGAAACACTGCAATTTATTAAAGTGATCAGCTGTAGGAAGTCT
GTTTTGGAATCAGCTCTGCAGATTCAAGAATACCGTCGTGAAGAAAGCAATTTCCAAGTT
CAAGTCTCATACAAAGACTAA

Peptide Sequence

PEP ID

XP_016451767.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1B-16 [Nicotiana tabacum]
Sequence

MEDIVESCDRTPTPTKSSSQRRYSPIDEDLEGLQDVAEQMMHQLIRGTAELDVISIVGMP
GQSKATLVRRLYNNPSIVSRFDVRAWCSFPQRYNVGKLLLEILKQIIAGKRITVGGHSMA
DMLHISLMGKRYLIVLDNIQEVKAWDVLWSSFPDDKNRSRIIVTTQIQQVAMGLKHHIDP
YFLRLLNDDESFKLWQRAAFQGEICPPELFEVGRLVTRGCKGLTDLIIMIAGSIPKKERG
DPKLWLKVARELSSHSLDDLLMKMIQSSYDRLEDHLKCCLLYMGLFPNGYEIPVSDLLKW
WIAEEFVQNIDTLKLEETSKSCLYDLVDRYLITVTETKSDGEIKYCKVREEVHDFCSRTI
RVEKFVQLVVPYNPHQPAVDTDEQRKCMYIHDTMKNEYSSDKAESFRETQGSLEFIAHPK
FSIPHRTNLYPLLNDFRLIRVLHLLDMYLESSWVTAFQSLTHLRYLAIFVKELDFKWLSH
LLHLQTLRVRSSYTMISPAIWKMAKLRHVDINEFSITWEENERVNFVESSEIVLYNLKTL
GMFYMSVAHMTPNFWEKFPNLEELRLHIDEFGDVPDDSVLSRKFDFPSSLKVLSLCDIFL
TDEVVLTIARLRHLETLKLSEIYFTGEKLLDLNDNEFPALRVLKLHHGFMMQWICSDASS
SFALLETLVIKSCSKLEEIPYSFADIETLQFIKVISCRKSVLESALQIQEYRREESNFQV
QVSYKD

Transcript Sequence

Gene sequence data has not been registered.